PubChem-MCP-Server
The PubChem MCP Server allows AI assistants to interface with PubChem's chemical database using the Model Context Protocol (MCP). It enables the search and retrieval of detailed chemical compound information, including molecular structures and properties, for programmatic use. This server provides a streamlined way for AI systems to leverage chemical data effectively.
PubChem MCP Server
🧪 Enable AI assistants to search and access chemical compound information through a simple MCP interface.
The PubChem MCP Server provides a bridge between AI assistants and PubChem's chemical database through the Model Context Protocol (MCP). It allows AI models to search for chemical compounds and access their detailed information in a programmatic way.
✨ Core Features
- 🔎 Compound Search: Query PubChem compounds by name, SMILES, or CID ✅
- 🧪 Chemical Structure: Access molecular structures and identifiers ✅
- 📊 Property Data: Retrieve detailed chemical and physical properties ✅
- 🔬 Advanced Search: Combine multiple parameters for precise queries ✅
- 🧬 Molecular Visualization: Generate and display molecular structures 📝
🚀 Quick Start
Installing via Smithery
To install PubChem Server for Claude Desktop automatically via Smithery.
Installing Manually
Install using uv:
📊 Usage
Start the MCP server:
Once the server is running, you can use the provided MCP tools in your AI assistant or application.